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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888984.1_cds_XP_016443640.1_38779
CDS Infomation

[gene=LOC107768978] [db_xref=GeneID:107768978] [protein=probable LRR receptor-like serine/threonine-protein kinase At1g34110] [protein_id=XP_016443640.1] [location=join(25411..28312,28535..28917)] [gbkey=CDS]
Sequence

ATGGAGAAGAAAAGCCACCATTTTCTCACCTCTTCTTCTTCAGCAACTTCCACTTCATGT
TATTTCTTGTTTTTCTTGTTCTTTTGTGTAAGTTTGAGTCCAAAAACAGTAGTTTTAGTT
AGCTCTGTTTCTTCTGATGGACAAGCACTGCTTTCTCTTCTTAAAGCAGCTGACCCTTAT
ACAAAATCATCTTCTTCTGTACTTTCTTCTTGGAATCCTTTAAGTTCAACTCCATGTTCT
TGGCAAGGGATTACTTGTTCTCCTCAAGAAAGAGTTATTTCACTTTCTATTCCAAATACA
TTCCTTAATCTCTCGTATTTACCCTCTGAACTCTCTTCCCTTTCTTCTTTGCAGCTTCTC
AATCTTTCTTCTACTAATATCTCTGGCACTATTCCTCCATCTTTTGGTTCTTTCTCTCAT
CTTAGGCTTTTAGACCTTTCTTCTAATTCTATTTATGGGTCTATTCCCTCAGAACTTGGT
GGGCTTACTTTACTTCAGTTCTTGTTCTTGAATTCAAATAGATTGACTGGTAAGATCCCA
CCTCAGCTTGTTAATCTTTCTTCACTAGAAATCCTTTGTCTTCAAGATAATCTCCTCAAT
GGTTCAATTCCATCACAGTTAGGGTCCTTGTTGTCACTTCAGCAGTTTAGGATTGGGGGA
AATCCATATTTGACTGGTGAAATTCCTGCACAATTGGGCCTGCTCACCAATCTTACAATG
TTTGGTGCCGCGGCCACCGGTCTTTCTGGTGTTATTCCACCCACATTTGGGAACTTAATC
AATCTTCAAACACTGGCAATTTATGATACTGAGGTATTTGGTTCCATACCGCCTGAACTT
GGGATGATTTCAGAGCTTAGGTACTTGTATCTGCATATGAATAAGCTCACTGGTTCAATC
CCTCCTCAGTTGGGTAAGTTACAAAAGCTAACTAGCTTGCTTTTATGGGGAAATTCATTA
ACTGGACCTATCCCGGCTGAGGTTTCGAATTGTTCATCCCTTGTGATTCTTGATTTTTCT
GCAAATGAGTTGTCCGGTGAAATTCCCGGTGACTTGGGGAAGCTATCGGTTCTTGAACAA
CTTCATTTGTCTGATAATGCATTTACTGGTTCTATACCATGGCAGTTAAGTAACTGCACT
AGCCTAACAGCTCTTCAGCTAGATAAGAACCAACTATCGGGGCAAATTCCGTGGCAAGTT
GGTAAGTTAAAGTACTTGCAGAGTTTTTTCTTGTGGGGAAATTCGGTTTCAGGAACCATT
CCAGCTGCTTTTGGAAACTGTACTGAGCTCTATGCGCTCGATCTTTCGAGGAACAAGCTC
ACTGGATCGATCCCTGAGGAGATATTTGATTTGAAGCAGCTGAGTAAATTGTTGCTTCTT
GGGAATTCGTTAACGGGAAGATTGCCTCGGAGTGTTGCGAGATGCCAGTCTCTGGTGAGG
TTGAGGCTCGGCGAGAATCAGCTTTCAGGAACAATTCCTAAGGAGATCGGTCAATTGCAG
AACCTCGTGTTTCTTGATTTGTACATGAACCATTTCTCTGGTGGCTTGCCTTCTGAAATT
GCCAACATTACGGTTCTTGAGCTGTTGGATGTTCACAACAATTACCTAACCGGGGAAATA
CCAAACGTGATGGGAGAGCTTGTGAATTTAGAGCAGCTTGATCTGAGCAGGAACAGCTTC
ACTGGTGAGATTCCTTCAAGTTTTGGCAATCTCAGTTACTTGAACAAACTTATTCTCAGC
AACAATCTGCTTACTAGTTCAATTCCTAAGTCTTTTAAGAACTTGCAGAAGTTAACTCTA
CTTGATTTGAGCTCGAATAGTTTTTCTGGTGAGATTCCATCTGAGCTTGGTTATGTCACA
AGCTTAACAATCAGTTTGGATTTGAGCTCGAATCGTTTTACTGGTGAACTTCCTGAAACA
TTGTCCGGTTTGACACAGTTGCAATCTCTTGATATTTCTCATAATTTGTTGAGTGGAAGG
ATCACAATTCTTAGCTTCCTGACCAGCCTTACTTCCCTGAATGTTTCGTACAACAATTTC
TCGGGGCCTATTCCTGTCACACCGTTCTTTAGAACTCTCAATTCATATTCTTTTCTGGAG
AATTCAAAGCTGTGTCAATCTATTGATGGTTCTACTTGTTCTTCACATATAATGGGAAAG
AACGGGTTGAAGTCAGCGAAAACCATAGCCTTGGTTGCGGTAATTCTGACTTCTGTAGCG
ATAGCAGTTGTGGCTACATGGATTATTGTGACGCGAAACCACATATATGTGTTTCAGAAG
TCTCAAGGCATGTCAGTCTCCTCTGTCGGAGCAGAAGACTTTTCCTACCCGTGGACTTTC
ATCCCCTTTCAAAAGTTCAATTTTACCATCGACAACATCTTGGATTGCTTGAAAGATGAA
AACATTATCGGGAAAGGCTGTTCAGGTGTTGTTTATAAAGCAGAAATGCCTAATGGCGAC
GTGATTGCAGTGAAGAAACTTTGGAAAACAAAGAAAGATGAGGAGCCAGTAGATTCTTTT
GCCGGAGAAATTCAAATTCTCGGACATATTAGGCATCGGAACATAGTGAAGTTATTGGGA
TATTGTTCAAACAGGAGCGTTAAGCTTCTTCTGTACAACTACATTTCAAATGGCAATCTT
CACCAGCTCTTGCAAAGTAACAGAAACTTGGACTGGGAAATTAGGTATAAAATTGCAGTT
GGATCAGCTCAAGGCCTTGCTTACCTGCACCATGACTGTGTTCCGGCCATTCTTCATAGA
GATGTCAAGTGCAATAATATACTGCTCGACTCCAAGTTCGATGCTTATATAGCAGATTTT
GGACTCGCAAAGCTAATGAATTCGCCAAACTATCACCACGCTATGTCCAGCGTAGCAGGC
TCTTATGGATATATTGCTCCAGAATATGGATACACGCTGAATATAACAGAAAAGAGCGAT
GTCTATAGTTATGGAGTGGTTCTGCTGGAAATACTTAGTGGGCGTAGTGCTGTTGATTCT
CAAATAGGTGATGGACTACACATCGTCGAGTGGGTAAAGAAGAAAATGGGAAGCTTTGAA
CCAGCTGTTACAGTTCTTGATGCTAAGCTACAAGGTTTACCGGATCAAATGGTGCAAGAA
ATGCTGCAAACGCTTGGAATAGCGATGTTCTGTGTGAACTCATCGCCGGCTGAAAGACCA
ACAATGAAAGAAGTGGTGGCACTTCTTATGGAAGTGAAGAGTTCACCTGAAGAGTTTGGG
AAAACTTCTCAGCCTCTAATAAAACAGTCCTCAACTCAAAGTTGA

Peptide Sequence

PEP ID

XP_016443640.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Nicotiana tabacum]
Sequence

MEKKSHHFLTSSSSATSTSCYFLFFLFFCVSLSPKTVVLVSSVSSDGQALLSLLKAADPY
TKSSSSVLSSWNPLSSTPCSWQGITCSPQERVISLSIPNTFLNLSYLPSELSSLSSLQLL
NLSSTNISGTIPPSFGSFSHLRLLDLSSNSIYGSIPSELGGLTLLQFLFLNSNRLTGKIP
PQLVNLSSLEILCLQDNLLNGSIPSQLGSLLSLQQFRIGGNPYLTGEIPAQLGLLTNLTM
FGAAATGLSGVIPPTFGNLINLQTLAIYDTEVFGSIPPELGMISELRYLYLHMNKLTGSI
PPQLGKLQKLTSLLLWGNSLTGPIPAEVSNCSSLVILDFSANELSGEIPGDLGKLSVLEQ
LHLSDNAFTGSIPWQLSNCTSLTALQLDKNQLSGQIPWQVGKLKYLQSFFLWGNSVSGTI
PAAFGNCTELYALDLSRNKLTGSIPEEIFDLKQLSKLLLLGNSLTGRLPRSVARCQSLVR
LRLGENQLSGTIPKEIGQLQNLVFLDLYMNHFSGGLPSEIANITVLELLDVHNNYLTGEI
PNVMGELVNLEQLDLSRNSFTGEIPSSFGNLSYLNKLILSNNLLTSSIPKSFKNLQKLTL
LDLSSNSFSGEIPSELGYVTSLTISLDLSSNRFTGELPETLSGLTQLQSLDISHNLLSGR
ITILSFLTSLTSLNVSYNNFSGPIPVTPFFRTLNSYSFLENSKLCQSIDGSTCSSHIMGK
NGLKSAKTIALVAVILTSVAIAVVATWIIVTRNHIYVFQKSQGMSVSSVGAEDFSYPWTF
IPFQKFNFTIDNILDCLKDENIIGKGCSGVVYKAEMPNGDVIAVKKLWKTKKDEEPVDSF
AGEIQILGHIRHRNIVKLLGYCSNRSVKLLLYNYISNGNLHQLLQSNRNLDWEIRYKIAV
GSAQGLAYLHHDCVPAILHRDVKCNNILLDSKFDAYIADFGLAKLMNSPNYHHAMSSVAG
SYGYIAPEYGYTLNITEKSDVYSYGVVLLEILSGRSAVDSQIGDGLHIVEWVKKKMGSFE
PAVTVLDAKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSSPEEFG
KTSQPLIKQSSTQS

Transcript Sequence

Gene sequence data has not been registered.